Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Rta_06210Heparanase/b-glucuronidase, Glycoside Hydrolase Family 79-like protein. (507 aa)    
Predicted Functional Partners:
Rta_06220
Candidate b-glucosidase, Glycoside Hydrolase Family 3.
 
   
 0.836
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.676
Rta_30450
Candidate membrane protein.
  
     0.538
Rta_06230
Candidate membrane protein.
       0.529
Rta_06240
Hypothetical protein.
       0.529
ligB
Candidate Aromatic ring-opening dioxygenase (Catalytic LigB subunit).
       0.465
Rta_36720
Esterase-like protein.
  
     0.453
Rta_16810
B-xylosidase/arabinofuranosidase, Glycoside Hydrolase Family 43-like protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.451
Rta_14280
Conserved hypothetical protein.
  
     0.448
Rta_07030
Conserved hypothetical protein.
  
     0.430
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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