Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Rta_06380Hydroxyperoxidase II-like protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (332 aa)    
Predicted Functional Partners:
kynU
Kynureninase (L-kynurenine hydrolase)-like protein; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
   
 
  0.904
Rta_06360
Conserved hypothetical protein.
  
 
 0.742
Rta_06370
Conserved hypothetical protein.
       0.689
Rta_03070
Conserved hypothetical protein.
   
 0.577
Rta_33810
Candidate nodulation protein N.
   
 0.577
Rta_06390
Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.508
katE
Candidate hydroperoxidase II.
 
 
0.501
katE-3
Candidate hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 
0.501
gltB
Candidate Ferredoxin-dependent glutamate synthase.
  
  
 0.500
Rta_16710
Acetohydroxy-acid synthase small subunit; Belongs to the TPP enzyme family.
  
 0.487
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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