Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_06700Candidate transporter. (556 aa)    
Predicted Functional Partners:
Rta_26630
Candidate molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
 0.572
Rta_06710
Hypothetical protein.
       0.563
Rta_26600
Rubredoxin--NAD(+) reductase (Rubredoxin reductase)-like protein; (Rubredoxin-nicotinamide adenine dinucleotide reductase) (NADH-rubredoxin reductase); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.531
Rta_06690
2-hydroxychromene-2-carboxylate isomerase-like protein.
       0.471
amtB
Candidate ammonia permease.
  
  
 0.454
moaE
(Molybdopterin synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin converting factor large subunit).
  
  
 0.428
Rta_30420
MelG protein (non-ribosomal peptide synthetase)-like protein.
  
  
 0.408
Rta_08580
Candidate molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.402
Rta_22600
Ferredoxin--nitrite reductase-like protein.
     
 0.402
moaA
Candidate molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
 0.402
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.