Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Rta_072503-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (265 aa)    
Predicted Functional Partners:
Rta_07240
Dihydroneopterin aldolase-like protein.
       0.786
Rta_37700
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.668
Rta_17220
3-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.666
phbB
Candidate acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.650
Rta_07260
Conserved hypothetical protein.
       0.629
Rta_27300
Gluconate 5-dehydrogenase (5-keto-D-gluconate 5- reductase)-like protein.
  
     0.596
Rta_04590
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.582
Rta_09040
3-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.565
Rta_17330
Candidate D-beta-hydroxybutyrate dehydrogenase (BDH); (3-hydroxybutyrate dehydrogenase) (3-HBDH); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.561
Rta_11260
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.548
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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