Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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idnKCandidate thermosensitive gluconokinase (Gluconate kinase 1). (170 aa)    
Predicted Functional Partners:
edd
Candidate phosphogluconate dehydratase (6-phosphogluconate dehydratase); Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.928
Rta_17730
Gluconolactonase precursor-like protein.
    
 0.913
tkrA
Candidate Gluconate 2-dehydrogenase (2-ketogluconate reductase); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.905
tkrA-2
Candidate 2-ketogluconate reductase (Gluconate 2-dehydrogenase); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.905
Rta_06280
Candidate oxidoreductase.
     
 0.904
Rta_06290
Conserved hypothetical protein.
     
 0.904
Rta_11590
Conserved hypothetical protein.
     
 0.904
Rta_11600
Choline dehydrogenase and related flavoprotein-like protein.
     
 0.904
Rta_07480
Transcriptional regulator, TetR family-like protein.
       0.773
rpiA
Candidate ribose 5-phosphate isomerase A (Phosphoriboisomerase A); Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.773
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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