Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_07500Conserved hypothetical protein. (329 aa)    
Predicted Functional Partners:
Rta_01740
Pentachlorophenol 4-monooxygenase-like protein.
 
    0.827
Rta_31330
Pentachlorophenol 4-monooxygenase (Pentachlorophenol hydroxylase)-like protein.
 
    0.827
Rta_31340
Conserved hypothetical protein.
 
     0.799
Rta_07480
Transcriptional regulator, TetR family-like protein.
 
     0.778
idnK
Candidate thermosensitive gluconokinase (Gluconate kinase 1).
       0.572
Rta_30410
Polyketide synthase-like protein.
 
 
 
 0.535
Rta_07510
Hypothetical protein.
       0.520
Rta_18070
Candidate maleylacetoacetate isomerase.
 
 
   0.472
Rta_13730
Candidate sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
 
 
 0.429
Rta_06950
Ferredoxin--NAD(+) reductase-like protein.
  
   
 0.427
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.