Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_08060Hypothetical protein. (165 aa)    
Predicted Functional Partners:
Rta_08070
Conserved hypothetical protein.
 
     0.862
Rta_08080
Hypothetical protein.
       0.773
Rta_08050
Transporter-like protein.
       0.668
Rta_08040
Candidate deoxyguanosinetriphosphate triphosphohydrolase (dGTPase); Belongs to the dGTPase family. Type 2 subfamily.
       0.628
aroB
Candidate 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.625
Rta_08090
Conserved hypothetical protein.
       0.559
pilN
Candidate Tfp pilus assembly protein PilN.
 
     0.510
gltB
Candidate Ferredoxin-dependent glutamate synthase.
       0.510
pilQ
Candidate Fimbrial assembly protein pilQ precursor, secretin family.
 
     0.498
pilP
Candidate type IV pilus assembly protein PilP, putative lipoprotein of the pilotin family.
 
     0.494
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.