Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_10880Candidate b-glycosyltransferase, Glycosyltransferase Family 2. (320 aa)    
Predicted Functional Partners:
Rta_10900
Candidate succinoglycan transport protein.
 
  
 0.879
Rta_10870
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
 
   
 0.833
Rta_10890
Candidate membrane protein.
 
  
 0.823
Rta_10910
Hypothetical protein.
       0.773
Rta_10850
A-glycosyltransferase, Glycosyltransferase Family 4-like protein.
 
  
 0.697
Rta_28290
Candidate sugar-1-phosphate transferase, membrane protein.
 
  
 0.621
galE-2
UDP- galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.615
Rta_10770
Candidate sugar-1-phosphate transferase, membrane protein.
 
  
 0.593
Rta_10920
Hypothetical protein.
       0.571
galE
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.560
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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