Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
eddCandidate phosphogluconate dehydratase (6-phosphogluconate dehydratase); Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (624 aa)    
Predicted Functional Partners:
eda
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase; Candidate bifunctional protein: 4-hydroxy-2-oxoglutarate aldolase (2-keto-4-hydroxyglutarate aldolase); 2- dehydro-3-deoxyphosphogluconate aldolase (Phospho-2- dehydro-3-deoxygluconate aldolase).
 
 
 0.997
idnK
Candidate thermosensitive gluconokinase (Gluconate kinase 1).
  
 
 0.928
zwf
Candidate glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.922
Rta_11250
Fructokinase-like protein.
    
 0.908
tkrA
Candidate Gluconate 2-dehydrogenase (2-ketogluconate reductase); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.901
Rta_11470
2- oxo-3-deoxygalactonate 6-phosphate aldolase; Galactonate dehydratase.
 
  
 0.686
ilvH
Candidate acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit).
 
 
 0.654
Rta_11330
Candidate cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
       0.623
gltB
Candidate Ferredoxin-dependent glutamate synthase.
  
  
 0.615
gapA
Candidate glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.606
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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