Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pitACandidate phosphate/sulphate permease. (336 aa)    
Predicted Functional Partners:
Rta_12050
Conserved hypothetical protein.
 
  
 0.992
rluA
Uracil hydrolyase.
  
    0.549
lysU
Candidate lysyl-tRNA synthetase (Lysine--tRNA ligase); Belongs to the class-II aminoacyl-tRNA synthetase family.
   
    0.508
pyrH
Uridylate kinase (Uridine monophosphate kinase)-like protein; Catalyzes the reversible phosphorylation of UMP to UDP.
   
    0.481
pstB
Candidate ABC type phosphate transport system, ATP-binding component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.441
Rta_19390
Conserved hypothetical protein.
  
  
 0.436
gltB
Candidate Ferredoxin-dependent glutamate synthase.
  
  
 0.433
ctaD
Candidate Cytochrome c oxidase polypeptide I (Cytochrome AA3 subunit 1).
   
  
 0.430
phoU
Candidate phosphate transport system protein PhoU; Plays a role in the regulation of phosphate uptake.
     
 0.402
Rta_23510
Candidate ABC type phosphate transport system, permease component.
     
 0.402
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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