Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fcbT2-2Candidate small permease component. (198 aa)    
Predicted Functional Partners:
fcbT3-2
Candidate large permease component.
 
  
 0.960
Rta_13110
TRAP-T mannitol/chloroaromatic compound transport system, periplasmic component-like protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.801
fcbT1-2
Candidate periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.801
fcbT1
Candidate periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.796
fcbT3
Candidate large permease component.
 
  
 0.789
Rta_13200
Conserved hypothetical protein.
       0.532
fcbT3-3
Candidate large permease component.
 
  
 0.489
Rta_13210
Conserved hypothetical protein.
       0.453
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.