Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_13560Candidate 5-oxoprolinase (5-oxo-L-prolinase); (Pyroglutamase) (5-oxoprolinase (ATP-hydrolyzing)). (1202 aa)    
Predicted Functional Partners:
Rta_11330
Candidate cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
  
 0.918
ggt
Glutamyl transpeptidase.
    
 0.909
Rta_16680
Gamma-glutamyltranspeptidase precursor (Gamma-glutamyltransferase)-like protein.
    
 0.909
Rta_20280
Gamma-glutamyltranspeptidase precursor (Gamma-glutamyltransferase)-like protein.
    
 0.909
Rta_24680
Gamma-glutamyltranspeptidase precursor-like protein.
    
 0.909
Rta_02410
Conserved hypothetical protein.
    
  0.902
gshA
Candidate gamma-glutamylcysteine synthetase (glutamate--cysteine ligase); Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
Rta_35950
Candidate carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
     
  0.900
gdhA
Candidate NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.855
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.841
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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