Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_13880Oxidoreductases-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)    
Predicted Functional Partners:
Rta_17220
3-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
 
   0.747
Rta_11260
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
 
   0.668
Rta_37700
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
 
   0.664
Rta_27300
Gluconate 5-dehydrogenase (5-keto-D-gluconate 5- reductase)-like protein.
  
 
   0.646
Rta_30090
UDP-galactose 4-epimerase.
  
 
   0.594
Rta_13890
Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.
       0.540
Rta_09030
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
 
   0.531
Rta_30410
Polyketide synthase-like protein.
  
 
 0.515
Rta_13870
Conserved hypothetical protein.
       0.500
Rta_07250
3-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
   0.451
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.