Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Rta_14180Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family. (386 aa)    
Predicted Functional Partners:
Rta_30230
Hypothetical protein; Belongs to the CoA-transferase III family.
  
     0.760
Rta_14210
acyl-CoA dehydrogenase-like protein.
  
 
  0.723
Rta_14190
Citrate lyase beta chain, citryl-CoA lyase subunit-like protein; Belongs to the HpcH/HpaI aldolase family.
  
    0.700
Rta_14200
Conserved hypothetical protein.
  
    0.690
Rta_14160
Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.
 
    
0.591
Rta_14140
Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).
  
 
  0.548
tctC-22
Candidate extracytoplasmic binding receptor.
  
    0.543
Rta_14150
Conserved hypothetical protein.
       0.450
Rta_14220
Transcriptional regulator, IclR family-like protein.
       0.443
Rta_14230
Conserved hypothetical protein.
  
    0.428
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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