Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_14320Oxidoreductases-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)    
Predicted Functional Partners:
Rta_14330
3-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
 
    
0.813
Rta_31380
Short-chain alcohol dehydrogenase of unknown specificity-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.692
Rta_37700
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.684
Rta_17220
3-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein.
  
     0.678
Rta_20970
3-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.621
Rta_17650
Oxidoreductases-like protein.
  
     0.530
Rta_14340
Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.
       0.508
Rta_30090
UDP-galactose 4-epimerase.
  
 
   0.508
Rta_27020
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.501
Rta_27300
Gluconate 5-dehydrogenase (5-keto-D-gluconate 5- reductase)-like protein.
  
     0.438
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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