Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_15680D-(-)-3-hydroxybutyrate oligomer hydrolase-like protein. (755 aa)    
Predicted Functional Partners:
Rta_18320
Candidate poly-beta-hydroxyalkanoate depolymerase.
  
  
 0.923
Rta_17330
Candidate D-beta-hydroxybutyrate dehydrogenase (BDH); (3-hydroxybutyrate dehydrogenase) (3-HBDH); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.902
Rta_15630
Candidate poly(3-hydroxybutyrate) depolymerase precursor (PHB depolymerase).
 
   
 0.787
Rta_15640
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
       0.777
Rta_15670
Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
livF
Candidate ABC type branched chain amino acid transport systems, ATP-binding component.
       0.768
Rta_15660
Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.768
Rta_15690
D-(-)-3-hydroxybutyrate oligomer hydrolase-like protein.
 
   
 0.712
Rta_36720
Esterase-like protein.
  
     0.673
Rta_08650
Conserved hypothetical protein.
  
     0.551
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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