Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_159103-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase)-like protein. (356 aa)    
Predicted Functional Partners:
ilvH
Candidate acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit).
  
 0.971
leuC-5
Alpha-IPM isomerase.
 
 0.952
leuC-2
Alpha-IPM isomerase.
 0.951
Rta_14300
Acetolactate synthase large subunit (Acetohydroxy-acid synthase large subunit)-like protein; Belongs to the TPP enzyme family.
 
 0.942
ilvI
Candidate acetolactate synthase large subunit (Acetohydroxy-acid synthase large subunit).
 
 0.942
Rta_16710
Acetohydroxy-acid synthase small subunit; Belongs to the TPP enzyme family.
  
 0.934
Rta_23720
Acetolactate synthase large subunit (Acetohydroxy-acid synthase large subunit)-like protein; Belongs to the TPP enzyme family.
  
 0.934
Rta_01290
Candidate Threonine dehydratase catabolic (Threonine deaminase).
  
 0.920
Rta_05340
Threonine deaminase.
  
 0.920
Rta_30300
Threonine dehydratase biosynthetic (Threonine deaminase)-like protein.
  
 0.920
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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