Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_16200long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)-like protein. (509 aa)    
Predicted Functional Partners:
Rta_30410
Polyketide synthase-like protein.
 
 0.958
Rta_23090
Aldehyde dehydrogenase (NAD+)-like protein; Belongs to the aldehyde dehydrogenase family.
  
 0.913
Rta_36350
1-acylglycerol-3-phosphate O-acyltransferase-like protein.
  
 0.906
Rta_18230
Candidate methylmalonyl-CoA mutase.
    
 0.903
Rta_04840
Polyketide synthase protein-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.899
Rta_32660
N-carbamoyl-L-amino-acid hydrolase-like protein.
   
 
  0.801
tctC-29
Candidate extracytoplasmic binding receptor.
       0.773
Rta_16180
malonyl-CoA decarboxylase (Malonyl-CoA carboxy-lyase)-like protein.
 
   
 0.758
Rta_16170
Transcriptional regulator, GntR family-like protein.
       0.658
Rta_04940
O-succinylbenzoate--CoA ligase-like protein.
  
     0.656
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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