Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_16290Unsaturated acyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)    
Predicted Functional Partners:
Rta_16280
Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.
    
  0.804
Rta_22040
3-hydroxybutyryl-CoA dehydrogenase (Beta- hydroxybutyryl-CoA dehydrogenase)-like protein.
 0.789
tctC-30
Candidate extracytoplasmic binding receptor.
       0.773
Rta_36460
Unsaturated acyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   0.758
Rta_16260
Candidate serine--glyoxylate aminotransferase (Serine--glyoxylate transaminase).
 
  
 0.746
Rta_30410
Polyketide synthase-like protein.
  
 0.646
Rta_16300
Hypothetical protein.
   
   0.631
Rta_05680
Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
Rta_18100
Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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