Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Rta_16400Candidate ABC transporter probably involved in cobalamin transport, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (359 aa)    
Predicted Functional Partners:
Rta_16410
Candidate ABC transporter probably involved in cobalamin transport, ATP-binding component.
 
 
 0.997
Rta_16390
Candidate ABC transporter probably involved in cobalamin transport, periplasmic component.
 
 
 0.984
Rta_16360
Candidate ABC transporter probably involved in cobalamin transport, periplasmic component.
 
 
 0.959
Rta_16370
Bifunctional cobalamin biosynthesis protein : Cobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
     
 0.848
Rta_16380
Obyrinic acid A,C-diamide synthase-like protein.
     
 0.839
Rta_16350
Outer membrane cobalamin receptor protein-like protein.
 
   
 0.832
Rta_16420
Candidate COB(I)alamin adenosyltransferase (Corrinoid adenosyltransferase); Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.806
cobT
Candidate Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
     
 0.759
cobD-2
Cobalamin biosynthesis protein, membrane protein-like protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.748
Rta_16480
Conserved hypothetical protein.
     
 0.745
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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