Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_16440Imidazole acetol- phosphate transaminase. (318 aa)    
Predicted Functional Partners:
hisB
Candidate Imidazoleglycerol-phosphate dehydratase.
 
 
 0.985
Rta_13660
Prephenate dehydrogenase-like protein.
  
 
 0.974
Rta_13670
Candidate bifunctional protein: chorismate mutase; prephenate dehydratase.
  
 
 0.957
dat
Candidate D-alanine aminotransferase.
 
 
 0.939
aspC
Aspartate transaminase.
   
 
 0.917
dadA
Candidate D-amino acid dehydrogenase small subunit.
  
  
 0.912
phhA
Candidate phenylalanine 4-monooxygenase (Phenylalanine-4-hydroxylase).
     
 0.911
aatA
Candidate aspartate aminotransferase.
  
 
 0.910
Rta_05500
Candidate 4-hydroxyphenylpyruvate dioxygenase.
    
 0.909
katG
Candidate hydroperoxidase I; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.907
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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