Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_16680Gamma-glutamyltranspeptidase precursor (Gamma-glutamyltransferase)-like protein. (536 aa)    
Predicted Functional Partners:
ggt
Glutamyl transpeptidase.
  
  
 
0.925
Rta_24680
Gamma-glutamyltranspeptidase precursor-like protein.
  
  
 
0.924
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 0.919
gshB
Candidate glutathione synthetase (glutathione synthase); Belongs to the prokaryotic GSH synthase family.
    
 0.910
Rta_35950
Candidate carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
  
 
 0.910
Rta_13560
Candidate 5-oxoprolinase (5-oxo-L-prolinase); (Pyroglutamase) (5-oxoprolinase (ATP-hydrolyzing)).
    
 0.909
gshA
Candidate gamma-glutamylcysteine synthetase (glutamate--cysteine ligase); Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
    
 0.906
Rta_01585
Candidate Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.905
Rta_37160
Candidate glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.905
Rta_20280
Gamma-glutamyltranspeptidase precursor (Gamma-glutamyltransferase)-like protein.
  
  
 
0.903
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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