Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tctC-34Candidate extracytoplasmic binding receptor. (328 aa)    
Predicted Functional Partners:
tctA
Candidate large integral membrane protein.
  
    0.819
tctA-3
Candidate large integral membrane protein.
  
    0.818
tctA-2
Candidate large integral membrane protein.
  
    0.759
Rta_16710
Acetohydroxy-acid synthase small subunit; Belongs to the TPP enzyme family.
       0.636
tctB
Candidate small integral membrane protein.
 
    0.558
Rta_16720
Ferredoxin--NAD(+) reductase-like protein.
       0.480
Rta_16730
4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase)-like protein; Belongs to the PdxA family.
       0.468
Rta_16740
Candidate terephthalate 1,2-dioxygenase oxygenase component small subunit.
       0.468
Rta_16750
Candidate terephthalate 1,2-dioxygenase oxygenase component large subunit.
       0.468
tctC-35
Candidate extracytoplasmic binding receptor.
 
    
0.463
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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