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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Rta_17330Candidate D-beta-hydroxybutyrate dehydrogenase (BDH); (3-hydroxybutyrate dehydrogenase) (3-HBDH); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)    
Predicted Functional Partners:
Rta_14820
Candidate succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (Succinyl CoA:3-oxoacid CoA-transferase).
 
 0.918
Rta_14810
Candidate succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl CoA:3-oxoacid CoA-transferase).
 
 
 0.915
Rta_06670
Candidate Hydroxymethylglutaryl-CoA lyase.
   
 
  0.913
Rta_14260
hydroxymethylglutaryl-CoA lyase (3-hydroxy-3-methylglutarate-CoA lyase)-like protein.
   
 
  0.913
Rta_21710
hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase)-like protein; (HL) (3- hydroxy-3-methylglutarate-CoA lyase).
   
 
  0.913
Rta_15680
D-(-)-3-hydroxybutyrate oligomer hydrolase-like protein.
     
 0.902
Rta_00980
Candidate acetoacetate--CoA ligase (Acetoacetyl-CoA synthetase).
     
  0.900
phbC
(PHB polymerase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase).
  
  
 0.741
Rta_17340
Conserved hypothetical protein.
 
  0.694
glcB
Candidate Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
      
 0.622
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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