Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdsACandidate Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); (CDP-diglyceride pyrophosphorylase) (CDP-diglyceride diphosphorylase) (CDP-diacylglycerol synthase); Belongs to the CDS family. (281 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.981
dxr
1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.950
pgsA
Cardiolipin synthase (CMP-forming); (Glycerophosphate phosphatidyltransferase) (3-phosphatidyl-1-glycerol-3-phosphate synthase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.950
plsC
Candidate 1-acylglycerol-3-phosphate O-acyltransferase (lyso-phosphatidic acid acyltransferase).
 
  
 0.930
Rta_17500
Candidate membrane protein.
  
  
 0.928
dgk
Candidate Diacylglycerol kinase (Diglyceride kinase); Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
 0.916
pssA
Candidate Phosphatidylserine synthase (CDP-diacylglycerol--serine O-phosphatidyltransferase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.915
pssA-2
Candidate Phosphatidylserine synthase (CDP-diacylglycerol--serine O-phosphatidyltransferase)(Phosphatidylserine synthase)(CDP-diglycerine-serine O-phosphatidyltransferase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.915
plsC-2
Candidate 1-acylglycerol-3-phosphate O-acyltransferase (lyso-phosphatidic acid acyltransferase).
    
 0.913
pyrH
Uridylate kinase (Uridine monophosphate kinase)-like protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.873
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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