Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Rta_18100Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)    
Predicted Functional Partners:
Rta_09140
Unsaturated acyl-CoA hydratase.
 
 0.998
Rta_20050
3-hydroxybutyryl-CoA epimerase-like protein.
 0.998
Rta_22040
3-hydroxybutyryl-CoA dehydrogenase (Beta- hydroxybutyryl-CoA dehydrogenase)-like protein.
 
 0.983
phbB
Candidate acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.977
Rta_05720
Unsaturated acyl-CoA reductaseButyryl dehydrogenase.
  
 0.946
Rta_06620
Candidate Long chain acyl-CoA dehydrogenase.
  
 0.946
Rta_14140
Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).
  
 0.946
Rta_14210
acyl-CoA dehydrogenase-like protein.
  
 0.946
Rta_16630
acyl-CoA dehydrogenase-like protein.
  
 0.946
Rta_18160
Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).
  
 0.946
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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