Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rta_18620Glutaredoxin-like protein. (217 aa)    
Predicted Functional Partners:
nrdA
Candidate ribonucleoside-diphosphate reductase, alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.918
prlC
Candidate oligopeptidase A.
       0.781
Rta_36950
Conserved hypothetical protein.
  
     0.763
Rta_09570
Conserved hypothetical protein.
  
     0.753
Rta_19690
Conserved hypothetical protein.
  
     0.746
Rta_08650
Conserved hypothetical protein.
  
     0.742
Rta_11570
Conserved hypothetical protein.
  
     0.732
Rta_37670
ProP effector-like protein.
  
   
 0.713
Rta_28190
Conserved hypothetical protein.
  
     0.705
Rta_04200
Candidate response regulator, CheY.
  
     0.704
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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