Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Rta_19060Xanthine phosphoribosyltransferase-like protein. (174 aa)    
Predicted Functional Partners:
purA
Candidate adenylosuccinate synthetase (IMP--aspartate ligase); Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
  
 0.773
hisZ
Candidate ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
       0.670
Rta_13580
Conserved hypothetical protein.
  
     0.631
Rta_23460
Candidate membrane protein.
 
     0.600
Rta_36900
Conserved hypothetical protein.
  
    0.600
Rta_05290
Protein-disulfide reductase (thioredoxin)-like protein.
  
     0.599
Rta_36570
Conserved hypothetical protein.
  
     0.544
Rta_37870
Conserved hypothetical protein.
  
     0.538
Rta_19030
Conserved hypothetical protein.
       0.533
hflK
Candidate HflK protein; HflC and HflK could encode or regulate a protease.
  
    0.527
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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