Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_19230Bifunctional protein : transcriptional regulator, MarR family; N-acetyltransferase-like protein. (325 aa)    
Predicted Functional Partners:
Rta_19460
Candidate histidine kinase, atypical hybrid.
 
  
 0.650
Rta_27370
Transcriptional regulator, ArsR family-like protein.
 
   
 0.566
Rta_12360
Candidate histidine kinase, atypical hybrid.
 
  
 0.562
Rta_19240
Sulfite oxidase-like protein.
       0.559
gltB
Candidate Ferredoxin-dependent glutamate synthase.
     
 0.553
Rta_04030
Transcriptional regulator, DeoR family-like protein.
 
     0.542
Rta_04020
Hypothetical protein.
 
    0.531
Rta_13670
Candidate bifunctional protein: chorismate mutase; prephenate dehydratase.
  
  
 0.529
chrA
Candidate chromate transport protein, half length.
       0.523
chrA-2
Candidate chromate transport protein, half length.
       0.523
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.