Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_19330Candidate histidine kinase, CheA. (946 aa)    
Predicted Functional Partners:
Rta_04410
Candidate histidine kinase, hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.998
pilI
Candidate twitching motility protein, chemotaxis protein cheW.
 
 
 0.995
pilJ
Candidate twitching motility protein, methyl-accepting chemotaxis protein.
 
 
 0.990
Rta_04400
Protein-glutamate methylesterase (protein methylesterase)-like protein.
 
 
 0.984
pilI-2
Candidate twitching motility protein, chemotaxis protein cheW.
 
 
 0.983
Rta_19460
Candidate histidine kinase, atypical hybrid.
  
 
 0.975
pilJ-2
Candidate twitching motility protein, methyl-accepting chemotaxis protein.
 
 
 0.970
Rta_12360
Candidate histidine kinase, atypical hybrid.
  
 
 0.964
Rta_29820
Flagellar biosynthesis/type III secretory pathway ATPase-like protein.
 
  
 0.955
Rta_01630
Candidate histidine kinase, atypical unorthodox.
  
 
 0.948
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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