Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tadACandidate bifunctional protein : haloalkane dehalogenase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (450 aa)    
Predicted Functional Partners:
adhC
Glutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.949
Rta_01070
Hypothetical protein.
  
 0.949
hisF-2
Candidate Phosphoribosyl-ATP pyrophosphatase.
   
  
 0.792
Rta_19780
Muramoyltetrapeptide carboxypeptidase (LD- carboxypeptidase A)-like protein.
       0.743
Rta_30410
Polyketide synthase-like protein.
  
 0.726
Rta_24620
Conserved hypothetical protein.
  
  
 0.716
birA
Candidate bifunctional protein (BirA) : transcriptional regulator (Biotin operon repressor), BirA family; Biotin-- [acetyl-CoA-carboxylase] synthetase (Biotin--protein ligase).
 
  
 0.673
Rta_36690
Conserved hypothetical protein.
 
  
 0.663
Rta_19760
Hypothetical protein.
       0.659
guaA
Candidate GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
 
 0.657
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: medium (50%) [HD]