Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_19890Alcohol dehydrogenase (Aldehyde reductase)-like protein. (378 aa)    
Predicted Functional Partners:
gabD
Candidate succinate-semialdehyde dehydrogenase (NADP+).
  
 0.927
Rta_02500
Candidate NADP-dependent alcohol dehydrogenase.
  
 
 0.702
Rta_19880
Triacylglycerol lipase (Lipase)-like protein; (Triglyceride lipase) (Tributyrase).
 
     0.627
Rta_19870
Conserved hypothetical protein.
     
 0.596
adhC
Glutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 
 0.512
Rta_01070
Hypothetical protein.
    
 
 0.512
guaA
Candidate GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.438
gltB
Candidate Ferredoxin-dependent glutamate synthase.
   
  
 0.429
Rta_37850
Bifunctional protein : malic enzyme; phosphate acetyltransferase (phosphotransacetylase)-like protein; Belongs to the malic enzymes family.
   
  
 0.426
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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