Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
msrBCandidate peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase); Belongs to the MsrB Met sulfoxide reductase family. (136 aa)    
Predicted Functional Partners:
msrA
Candidate peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.992
Rta_20190
Intracellular septation protein-like protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.881
Rta_20200
BolA protein-like protein; Belongs to the BolA/IbaG family.
  
    0.829
Rta_05080
Thiol:disulfide reductase (thiol:disulfide interchange protein)-like protein.
   
 
 0.794
Rta_20210
Peptidylprolyl isomerase.
     
 0.701
grpE
Candidate heat shock protein, HSP70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. S [...]
 
 
 
 0.670
katE
Candidate hydroperoxidase II.
  
 
 0.591
katE-3
Candidate hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.591
Rta_28090
Succinate dehydrogenase hydrophobic membrane anchor protein-like protein.
   
    0.510
Rta_28080
Succinate dehydrogenase cytochrome b-556 subunit-like protein.
   
  
 0.504
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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