Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_20200BolA protein-like protein; Belongs to the BolA/IbaG family. (89 aa)    
Predicted Functional Partners:
Rta_29030
Conserved hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.921
Rta_20190
Intracellular septation protein-like protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.851
msrB
Candidate peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase); Belongs to the MsrB Met sulfoxide reductase family.
  
    0.829
Rta_08200
Conserved hypothetical protein; Belongs to the BolA/IbaG family.
 
   
 0.755
Rta_20210
Peptidylprolyl isomerase.
  
    0.734
ftsZ
Candidate cell division tubulin-like GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.671
mreB
Candidate cell morphogenesis actin-like ATPase.
      
 0.670
rodA
Candidate rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
      
 0.657
pbp2
Candidate cell division penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall.
      
 0.618
mreD
Candidate cell shape-determining, membrane protein.
      
 0.618
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.