Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pobACandidate P-hydroxybenzoate hydroxylase (4-hydroxybenzoate 3- monooxygenase). (392 aa)    
Predicted Functional Partners:
Rta_12030
Protocatechuate 3,4-dioxygenase, beta subunit-like protein.
 
  
 0.979
Rta_24760
Candidate protocatechuate 4,5-dioxygenase beta chain.
 
  
 0.956
Rta_24770
Candidate protocatechuate 4,5-dioxygenase alpha chain.
 
  
 0.951
Rta_32470
Candidate 4-hydroxybenzoyl-CoA thioesterase.
     
  0.900
Rta_20530
Transcriptional regulator, IclR family-like protein.
 
   
 0.761
Rta_14780
4-carboxymuconolactone decarboxylase-like protein.
 
   
 0.685
Rta_24990
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase-like protein.
 
  
 0.627
alkK
Candidate medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase).
      
 0.621
Rta_25030
Transcriptional regulator, MarR family-like protein.
  
    0.586
Rta_24800
Candidate 4-oxalomesaconate hydratase.
 
  
 0.580
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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