| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_10950 | nth | Rta_10950 | Rta_16580 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.524 |
| Rta_10950 | polA | Rta_10950 | Rta_12840 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
| Rta_10950 | xthA | Rta_10950 | Rta_14470 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| Rta_10950 | xthB | Rta_10950 | Rta_20710 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| Rta_10950 | xthC | Rta_10950 | Rta_03890 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| Rta_20720 | xthB | Rta_20720 | Rta_20710 | Hypothetical protein. | Candidate exodeoxyribonuclease III. | 0.537 |
| dnaN | mutY | Rta_00020 | Rta_33220 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | 0.802 |
| dnaN | polA | Rta_00020 | Rta_12840 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.976 |
| dnaN | ung | Rta_00020 | Rta_35780 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate uracil DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.832 |
| dnaN | xthA | Rta_00020 | Rta_14470 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| dnaN | xthB | Rta_00020 | Rta_20710 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| dnaN | xthC | Rta_00020 | Rta_03890 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| hfq | nth | Rta_18990 | Rta_16580 | Candidate host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Candidate endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.466 |
| hfq | polA | Rta_18990 | Rta_12840 | Candidate host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.413 |
| hfq | xthA | Rta_18990 | Rta_14470 | Candidate host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Candidate exodeoxyribonuclease III. | 0.536 |
| hfq | xthB | Rta_18990 | Rta_20710 | Candidate host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Candidate exodeoxyribonuclease III. | 0.536 |
| hfq | xthC | Rta_18990 | Rta_03890 | Candidate host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Candidate exodeoxyribonuclease III. | 0.536 |
| mutY | dnaN | Rta_33220 | Rta_00020 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | 0.802 |
| mutY | polA | Rta_33220 | Rta_12840 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.459 |
| mutY | ung | Rta_33220 | Rta_35780 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate uracil DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.405 |
