Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_22600Ferredoxin--nitrite reductase-like protein. (608 aa)    
Predicted Functional Partners:
cysH
3 - phosphoadenylylsulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
 0.999
Rta_22610
Conserved hypothetical protein.
 
  
 0.988
cysN
ATP-sulfurylase large subunit.
 
  
 0.985
cysD
ATP-sulfurylase small subunit.
 
  
 0.983
Rta_13050
3-mercaptopyruvate sulfurtransferase (Rhodanese- like protein)-like protein.
 
  
 0.944
metZ
Cystathionine gamma-synthase (O-succinylhomoserine (Thiol)-lyase)-like protein; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.935
Rta_13730
Candidate sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
  
 0.921
Rta_19240
Sulfite oxidase-like protein.
   
 
 0.913
Rta_13740
Cytochrome c-like protein.
     
 0.901
cysA
Candidate ABC type sulfate/molybdate transport systems, ATP-binding component; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
  
 0.901
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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