Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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thiGCandidate thiazole biosynthesis protein thiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. (259 aa)    
Predicted Functional Partners:
thiO
Candidate thiamine biosynthesis oxidoreductase.
 
 
 0.997
thiE
Thiamine-phosphate synthase.
  
 0.997
thiS
Candidate ThiS protein.
  
 
 0.994
thiD
Candidate phosphomethylpyrimidine kinase (HMP-phosphate kinase).
 
  
 0.980
Rta_30810
Candidate molybdopterin and thiamine biosynthesis protein.
 
  
 0.958
dxs
1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating); Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
     
 0.929
Rta_34180
Phosphomethylpyrimidine kinase (HMP-phosphate kinase)-like protein.
 
  
 0.823
Rta_22720
Candidate ABC type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
    0.784
Rta_22710
3-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.773
Rta_22760
Long-chain-fatty-acid--luciferin-component ligase (Acyl- protein synthetase)-like protein.
 
     0.749
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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