Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Rta_23090Aldehyde dehydrogenase (NAD+)-like protein; Belongs to the aldehyde dehydrogenase family. (477 aa)    
Predicted Functional Partners:
Rta_02980
Candidate NAD-dependent aldehyde dehydrogenase.
  
  
 
0.923
Rta_02500
Candidate NADP-dependent alcohol dehydrogenase.
  
 0.922
adhC
Glutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.918
Rta_01070
Hypothetical protein.
  
 0.918
Rta_02880
Candidate Haloacetate dehalogenase.
  
 
 0.916
Rta_24480
Candidate haloacetate dehalogenase H-1.
  
 
 0.915
Rta_04750
2-hydroxy-3-oxopropionate reductase-like protein.
  
 
 0.914
Rta_05920
3-hydroxyisobutyrate dehydrogenase-like protein.
  
 
 0.914
Rta_16200
long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)-like protein.
  
 0.913
Rta_10430
Acetyl-CoA synthase (Acetate thiokinase).
   
 0.911
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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