Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tctC-47Candidate extracytoplasmic binding receptor. (337 aa)    
Predicted Functional Partners:
Rta_32790
Candidate ABC type branched chain amino acid transport systems, periplasmic component.
   
    0.853
Rta_11280
Candidate isoquinoline 1-oxidoreductase, alpha subunit.
   
    0.822
tctA-3
Candidate large integral membrane protein.
  
    0.803
tctA
Candidate large integral membrane protein.
  
    0.799
tctA-2
Candidate large integral membrane protein.
  
    0.760
Rta_23930
Salicylate hydroxylase (Salicylate 1-monooxygenase)-like protein.
  
    0.744
Rta_17950
Salicylate hydroxylase (Salicylate 1-monooxygenase)-like protein.
   
    0.632
Rta_27950
Salicylate hydroxylase (Salicylate 1-monooxygenase)-like protein.
   
    0.632
Rta_23950
Transcriptional regulator, MarR family-like protein.
       0.615
tctC-46
Candidate extracytoplasmic binding receptor.
 
    
0.542
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.