Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
vapC-4Plasmid stability protein stbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa)    
Predicted Functional Partners:
Rta_24030
Conserved hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.949
Rta_18200
Conserved hypothetical protein.
 
 
 
 0.854
Rta_09820
Virulence-associated protein-like protein.
 
 
 0.841
thrC
Candidate threonine synthase.
       0.768
moaE
(Molybdopterin synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin converting factor large subunit).
       0.762
moaD
(Molybdopterin synthase subunit 1) (Molybdenum cofactor biosynthesis protein D) (Molybdopterin converting factor small subunit).
       0.762
moeA-2
Candidate molybdopterin biosynthesis protein moeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.762
mobB
Candidate molybdopterin-guanine dinucleotide biosynthesis protein B.
       0.762
vapC-2
Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.759
Rta_05710
Conserved hypothetical protein.
  
     0.612
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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