| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_04030 | rpoA | Rta_04030 | Rta_36050 | Transcriptional regulator, DeoR family-like protein. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
| Rta_04030 | rpoB | Rta_04030 | Rta_35690 | Transcriptional regulator, DeoR family-like protein. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
| Rta_04030 | rpoC | Rta_04030 | Rta_35680 | Transcriptional regulator, DeoR family-like protein. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.830 |
| Rta_04030 | rpoS | Rta_04030 | Rta_24400 | Transcriptional regulator, DeoR family-like protein. | Candidate RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.717 |
| Rta_04030 | rpoZ | Rta_04030 | Rta_32990 | Transcriptional regulator, DeoR family-like protein. | DNA-directed RNA polymerase omega chain (RNAP omega subunit); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.799 |
| Rta_24390 | Rta_24410 | Rta_24390 | Rta_24410 | 3-5 exonuclease protein-like protein. | Conserved hypothetical protein. | 0.635 |
| Rta_24390 | pcm | Rta_24390 | Rta_24420 | 3-5 exonuclease protein-like protein. | Candidate protein-L-isoaspartate O-methyltransferase (Protein- beta-aspartate methyltransferase); (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase). | 0.617 |
| Rta_24390 | rpoS | Rta_24390 | Rta_24400 | 3-5 exonuclease protein-like protein. | Candidate RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.758 |
| Rta_24410 | Rta_24390 | Rta_24410 | Rta_24390 | Conserved hypothetical protein. | 3-5 exonuclease protein-like protein. | 0.635 |
| Rta_24410 | pcm | Rta_24410 | Rta_24420 | Conserved hypothetical protein. | Candidate protein-L-isoaspartate O-methyltransferase (Protein- beta-aspartate methyltransferase); (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase). | 0.824 |
| Rta_24410 | rpoS | Rta_24410 | Rta_24400 | Conserved hypothetical protein. | Candidate RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.777 |
| dnaG | recA-2 | Rta_24700 | Rta_37450 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate DNA recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.480 |
| dnaG | rpoA | Rta_24700 | Rta_36050 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.533 |
| dnaG | rpoB | Rta_24700 | Rta_35690 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.623 |
| dnaG | rpoC | Rta_24700 | Rta_35680 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.420 |
| dnaG | rpoS | Rta_24700 | Rta_24400 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.746 |
| pcm | Rta_24390 | Rta_24420 | Rta_24390 | Candidate protein-L-isoaspartate O-methyltransferase (Protein- beta-aspartate methyltransferase); (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase). | 3-5 exonuclease protein-like protein. | 0.617 |
| pcm | Rta_24410 | Rta_24420 | Rta_24410 | Candidate protein-L-isoaspartate O-methyltransferase (Protein- beta-aspartate methyltransferase); (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase). | Conserved hypothetical protein. | 0.824 |
| pcm | rpoS | Rta_24420 | Rta_24400 | Candidate protein-L-isoaspartate O-methyltransferase (Protein- beta-aspartate methyltransferase); (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase). | Candidate RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.695 |
| recA-2 | dnaG | Rta_37450 | Rta_24700 | Candidate DNA recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.480 |
