| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_28880 | rpoA | Rta_28880 | Rta_36050 | Transcriptional regulator, MerR family-like protein. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.491 |
| Rta_28880 | rpoB | Rta_28880 | Rta_35690 | Transcriptional regulator, MerR family-like protein. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.562 |
| Rta_28880 | rpoC | Rta_28880 | Rta_35680 | Transcriptional regulator, MerR family-like protein. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.502 |
| Rta_28880 | rpoD | Rta_28880 | Rta_24710 | Transcriptional regulator, MerR family-like protein. | Candidate RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.761 |
| Rta_28880 | rpoZ | Rta_28880 | Rta_32990 | Transcriptional regulator, MerR family-like protein. | DNA-directed RNA polymerase omega chain (RNAP omega subunit); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.479 |
| dnaG | nusA | Rta_24700 | Rta_19580 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | L factor; Participates in both transcription termination and antitermination. | 0.457 |
| dnaG | nusG | Rta_24700 | Rta_35740 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate transcription antitermination protein; Participates in transcription elongation, termination and antitermination. | 0.470 |
| dnaG | rpoA | Rta_24700 | Rta_36050 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.533 |
| dnaG | rpoB | Rta_24700 | Rta_35690 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.623 |
| dnaG | rpoC | Rta_24700 | Rta_35680 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.420 |
| dnaG | rpoD | Rta_24700 | Rta_24710 | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Candidate RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.893 |
| lexA | rpoD | Rta_21990 | Rta_24710 | Candidate transcriptional regulator LexA (Repressor lexA), LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | Candidate RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.730 |
| nusA | dnaG | Rta_19580 | Rta_24700 | L factor; Participates in both transcription termination and antitermination. | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.457 |
| nusA | nusG | Rta_19580 | Rta_35740 | L factor; Participates in both transcription termination and antitermination. | Candidate transcription antitermination protein; Participates in transcription elongation, termination and antitermination. | 0.981 |
| nusA | rpoA | Rta_19580 | Rta_36050 | L factor; Participates in both transcription termination and antitermination. | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
| nusA | rpoB | Rta_19580 | Rta_35690 | L factor; Participates in both transcription termination and antitermination. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
| nusA | rpoC | Rta_19580 | Rta_35680 | L factor; Participates in both transcription termination and antitermination. | Candidate DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.968 |
| nusA | rpoD | Rta_19580 | Rta_24710 | L factor; Participates in both transcription termination and antitermination. | Candidate RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.821 |
| nusA | rpoZ | Rta_19580 | Rta_32990 | L factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase omega chain (RNAP omega subunit); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.816 |
| nusG | dnaG | Rta_35740 | Rta_24700 | Candidate transcription antitermination protein; Participates in transcription elongation, termination and antitermination. | Candidate DNA primase protein DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.470 |
