Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rta_24880 | Rta_24890 | Rta_24880 | Rta_24890 | Permease-like protein. | Conserved hypothetical protein. | 0.778 |
Rta_24880 | dctM-8 | Rta_24880 | Rta_24910 | Permease-like protein. | Candidate small permease component. | 0.834 |
Rta_24880 | dctP-8 | Rta_24880 | Rta_24920 | Permease-like protein. | Candidate periplasmic component. | 0.802 |
Rta_24880 | dctQ-8 | Rta_24880 | Rta_24900 | Permease-like protein. | Candidate large permease component. | 0.779 |
Rta_24890 | Rta_24880 | Rta_24890 | Rta_24880 | Conserved hypothetical protein. | Permease-like protein. | 0.778 |
Rta_24890 | dctM-8 | Rta_24890 | Rta_24910 | Conserved hypothetical protein. | Candidate small permease component. | 0.737 |
Rta_24890 | dctP-8 | Rta_24890 | Rta_24920 | Conserved hypothetical protein. | Candidate periplasmic component. | 0.716 |
Rta_24890 | dctQ-8 | Rta_24890 | Rta_24900 | Conserved hypothetical protein. | Candidate large permease component. | 0.739 |
dctM-8 | Rta_24880 | Rta_24910 | Rta_24880 | Candidate small permease component. | Permease-like protein. | 0.834 |
dctM-8 | Rta_24890 | Rta_24910 | Rta_24890 | Candidate small permease component. | Conserved hypothetical protein. | 0.737 |
dctM-8 | dctP | Rta_24910 | Rta_04230 | Candidate small permease component. | Candidate periplasmic component. | 0.765 |
dctM-8 | dctP-7 | Rta_24910 | Rta_17890 | Candidate small permease component. | Candidate periplasmic component. | 0.817 |
dctM-8 | dctP-8 | Rta_24910 | Rta_24920 | Candidate small permease component. | Candidate periplasmic component. | 0.952 |
dctM-8 | dctQ-8 | Rta_24910 | Rta_24900 | Candidate small permease component. | Candidate large permease component. | 0.920 |
dctP | dctM-8 | Rta_04230 | Rta_24910 | Candidate periplasmic component. | Candidate small permease component. | 0.765 |
dctP | dctP-2 | Rta_04230 | Rta_09010 | Candidate periplasmic component. | Candidate periplasmic component. | 0.548 |
dctP | dctQ-8 | Rta_04230 | Rta_24900 | Candidate periplasmic component. | Candidate large permease component. | 0.791 |
dctP-2 | dctP | Rta_09010 | Rta_04230 | Candidate periplasmic component. | Candidate periplasmic component. | 0.548 |
dctP-2 | dctQ-8 | Rta_09010 | Rta_24900 | Candidate periplasmic component. | Candidate large permease component. | 0.761 |
dctP-3 | dctQ-8 | Rta_11220 | Rta_24900 | Candidate periplasmic component. | Candidate large permease component. | 0.790 |
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