Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_25010long-chain-fatty-acid--CoA ligase-like protein. (626 aa)    
Predicted Functional Partners:
Rta_30410
Polyketide synthase-like protein.
  
 0.951
Rta_25000
Unsaturated acyl-CoA hydratase.
 
 
 0.942
Rta_24990
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase-like protein.
 
   
 0.887
Rta_25030
Transcriptional regulator, MarR family-like protein.
 
     0.865
tctC-48
Candidate extracytoplasmic binding receptor.
 
     0.671
Rta_32470
Candidate 4-hydroxybenzoyl-CoA thioesterase.
 
  
 0.650
Rta_19200
Conserved hypothetical protein; Belongs to the UPF0311 family.
  
   
 0.644
Rta_30600
Formate dehydrogenase beta subunit; NADH:ubiquinone oxidoreductase subunit 2 or 24 kDa subunit and subunit 1 or 51 kDa subunit fusion, chain E and chain F fusion-like protein.
    
 
 0.621
Rta_22310
Unsaturated acyl-CoA hydratase.
 
   0.611
Rta_22300
Candidate benzoyl-CoA oxygenase component B.
  
   
 0.574
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.