Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_251602-nitropropane dioxygenase precursor (Nitroalkane oxidase)-like protein. (319 aa)    
Predicted Functional Partners:
Rta_26600
Rubredoxin--NAD(+) reductase (Rubredoxin reductase)-like protein; (Rubredoxin-nicotinamide adenine dinucleotide reductase) (NADH-rubredoxin reductase); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.906
Rta_26630
Candidate molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.901
Rta_26620
Similar to assimilatory nitrite reductase [NAD(P)H] small subunit of Bacillus subtilis, which contains a ferredoxin domain-like protein.
     
  0.900
Rta_25170
Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).
  
  
 0.845
Rta_30410
Polyketide synthase-like protein.
  
 
 0.798
Rta_25190
Candidate electron transfer flavoprotein beta-subunit (Electron transfer flavoprotein small subunit).
  
  
 0.693
fabD
Candidate [Acyl-carrier-protein] S-malonyltransferase.
  
  
 0.686
Rta_25180
Candidate electron transfer flavoprotein alpha-subunit (Electron transfer flavoprotein large subunit).
       0.680
Rta_31740
acyl-CoA dehydrogenase-like protein.
 
  
 0.644
fabB
Candidate 3-oxoacyl-[acyl-carrier-protein] synthase I (Beta-ketoacyl-ACP synthase); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.587
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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