Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mltBCandidate peptidoglycan lytic transglycosylase (MltB), Glycoside Hydrolase Family 23. (309 aa)    
Predicted Functional Partners:
Rta_25230
Conserved hypothetical protein.
       0.630
Rta_25240
Candidate membrane protein.
       0.630
Rta_25260
Hypothetical protein.
       0.605
secB
Candidate protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.520
Rta_25210
Histone deacetylase-like protein.
       0.488
Rta_30820
Conserved hypothetical protein.
  
    0.450
lptD
Organic solvent tolerance protein precursor-like protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
   
 0.433
mltG
Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
  
 0.426
pbp2
Candidate cell division penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall.
   
 
 0.418
Rta_21120
Candidate membrane protein.
  
   
 0.417
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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