Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rta_26260Candidate ABC type multidrug transport system, ATP-binding and permease components. (593 aa)    
Predicted Functional Partners:
cysA
Candidate ABC type sulfate/molybdate transport systems, ATP-binding component; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.852
Rta_30410
Polyketide synthase-like protein.
  
 0.728
Rta_26250
Blue copper oxidase cueO precursor (Copper efflux oxidase)-like protein.
  
 
 0.627
Rta_09310
ATP-binding cassette, subfamily B, bacterial; Candidate ABC type transport system involved in Fe S cluster assembly, permease and ATPase components.
  
 
0.580
Rta_01300
ATPase protein, AAA family-like protein.
   
 0.541
dnaK
Candidate heat shock protein, HSP70 family; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.526
Rta_26120
Candidate ABC type transport system, involved in lipoprotein release, permease component with duplicated domains.
 
   
 0.526
Rta_27740
Candidate ABC type bacteriocin/lantibiotic exporters, ATP-binding and permease domains.
   
 
 0.514
Rta_28350
Chaperone protein-like protein.
  
 0.451
kdsD
Candidate Arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.443
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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