Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rta_26710 | Rta_26730 | Rta_26710 | Rta_26730 | Conserved hypothetical protein; Belongs to the UPF0307 family. | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | 0.773 |
Rta_26710 | mog | Rta_26710 | Rta_26720 | Conserved hypothetical protein; Belongs to the UPF0307 family. | Candidate molybdopterin biosynthesis mog protein. | 0.806 |
Rta_26710 | mqnA | Rta_26710 | Rta_26690 | Conserved hypothetical protein; Belongs to the UPF0307 family. | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.564 |
Rta_26710 | pmbA | Rta_26710 | Rta_26700 | Conserved hypothetical protein; Belongs to the UPF0307 family. | Candidate PmbA protein. | 0.627 |
Rta_26730 | Rta_26710 | Rta_26730 | Rta_26710 | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | Conserved hypothetical protein; Belongs to the UPF0307 family. | 0.773 |
Rta_26730 | mog | Rta_26730 | Rta_26720 | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | Candidate molybdopterin biosynthesis mog protein. | 0.774 |
Rta_26730 | mqnA | Rta_26730 | Rta_26690 | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.564 |
Rta_26730 | pmbA | Rta_26730 | Rta_26700 | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | Candidate PmbA protein. | 0.571 |
mog | Rta_26710 | Rta_26720 | Rta_26710 | Candidate molybdopterin biosynthesis mog protein. | Conserved hypothetical protein; Belongs to the UPF0307 family. | 0.806 |
mog | Rta_26730 | Rta_26720 | Rta_26730 | Candidate molybdopterin biosynthesis mog protein. | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | 0.774 |
mog | mqnA | Rta_26720 | Rta_26690 | Candidate molybdopterin biosynthesis mog protein. | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.564 |
mog | pmbA | Rta_26720 | Rta_26700 | Candidate molybdopterin biosynthesis mog protein. | Candidate PmbA protein. | 0.609 |
mqnA | Rta_26710 | Rta_26690 | Rta_26710 | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Conserved hypothetical protein; Belongs to the UPF0307 family. | 0.564 |
mqnA | Rta_26730 | Rta_26690 | Rta_26730 | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | 0.564 |
mqnA | mog | Rta_26690 | Rta_26720 | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Candidate molybdopterin biosynthesis mog protein. | 0.564 |
mqnA | pmbA | Rta_26690 | Rta_26700 | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Candidate PmbA protein. | 0.779 |
pmbA | Rta_26710 | Rta_26700 | Rta_26710 | Candidate PmbA protein. | Conserved hypothetical protein; Belongs to the UPF0307 family. | 0.627 |
pmbA | Rta_26730 | Rta_26700 | Rta_26730 | Candidate PmbA protein. | glutamyl-tRNA(Gln) amidotransferase subunit A-like protein. | 0.571 |
pmbA | mog | Rta_26700 | Rta_26720 | Candidate PmbA protein. | Candidate molybdopterin biosynthesis mog protein. | 0.609 |
pmbA | mqnA | Rta_26700 | Rta_26690 | Candidate PmbA protein. | Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.779 |
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