Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Rta_26970Hypothetical protein. (164 aa)    
Predicted Functional Partners:
glnS
Candidate glutaminyl-tRNA synthetase (Glutamine--tRNA ligase).
  
    0.547
Rta_08800
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
   
    0.538
Rta_17840
Transcriptional regulator, MerR family-like protein.
   
    0.531
katE
Candidate hydroperoxidase II.
  
  
 0.449
katE-3
Candidate hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.449
bfr
Candidate bacterioferritin; Iron-storage protein.
   
  
 0.432
Rta_08830
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase)-like protein.
   
    0.407
rsbR
Candidate signal transduction protein (modulator protein rsbR), STAS domain protein.
   
    0.406
rsbS
Candidate signal transduction protein (antagonist protein rsbS), STAS domain protein.
   
    0.406
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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